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7PCP

Crystal structure of CD73 in complex with 5-iodouracil in the open form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-17
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9184
Spacegroup nameP 21 21 2
Unit cell lengths67.220, 131.820, 66.324
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.260 - 1.377
R-factor0.1272
Rwork0.125
R-free0.16640
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)4h2g
RMSD bond length0.014
RMSD bond angle1.873
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2601.400
High resolution limit [Å]1.3771.377
Rmerge0.0540.768
Number of reflections1223965612
<I/σ(I)>11.31.4
Completeness [%]99.1
Redundancy3.7
CC(1/2)0.9990.534
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2927 mg/mL protein concentration, 100 mM Tris pH 7.8, 10 % PEG6000, equal amounts of protein and reservoir. Following crystal formation (1-2 days), the crystals were transferred to soaking solution containing reservoir solution and 10 mM 5-iodouracil. Crystals were then transferred to cryo solution containing an additional 20 % glycerol, soaked for ~2-5 min, and flash frozen in liquid nitrogen.

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