7OU6
Human O-GlcNAc hydrolase in complex with DNJNAc-thiazolidines
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-11 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9763 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 101.288, 101.288, 284.519 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 58.278 - 2.410 |
Rwork | 0.221 |
R-free | 0.27140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5m7r |
RMSD bond length | 0.007 |
RMSD bond angle | 1.534 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 58.278 | 2.480 |
High resolution limit [Å] | 2.410 | 2.410 |
Rmerge | 0.054 | 2.280 |
Rmeas | 0.056 | 2.356 |
Rpim | 0.014 | 0.590 |
Number of reflections | 58274 | 4446 |
<I/σ(I)> | 26.5 | 1.5 |
Completeness [%] | 100.0 | |
Redundancy | 15.8 | |
CC(1/2) | 1.000 | 0.563 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291.15 | 0.14 - 0.2 M triammonium citrate pH 7.5, 16-20 % PEG 3350 |