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7OMF

Structure of a minimal SF3B core in complex with sudemycin D6 (form I)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyPIXEL
Collection date2019-08-29
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths106.355, 109.846, 253.300
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.030 - 3.000
R-factor0.2341
Rwork0.232
R-free0.26610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5ife 6en4
RMSD bond length0.003
RMSD bond angle0.604
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.19_4092)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.0302.970
High resolution limit [Å]2.9002.900
Rmerge0.0864.094
Rmeas0.0904.249
Rpim0.0241.131
Number of reflections665734382
<I/σ(I)>19.10.7
Completeness [%]99.998.9
Redundancy13.713.8
CC(1/2)1.0000.389
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277.150.1M Bis-tris propane pH 7.4, 0.2M KSCN, 12% (w/v) PEG-3350, 10%(v/v) Glycerol

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