7OKF
Crystal structure of human BCL6 BTB domain in complex with compound 8c
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU FR-X |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2016-07-07 |
| Detector | DECTRIS PILATUS 300K |
| Wavelength(s) | 1.5419 |
| Spacegroup name | P 61 2 2 |
| Unit cell lengths | 67.270, 67.270, 165.417 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 33.630 - 1.600 |
| R-factor | 0.167 |
| Rwork | 0.167 |
| R-free | 0.17800 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3bim |
| RMSD bond length | 0.010 |
| RMSD bond angle | 0.950 |
| Data reduction software | DIALS |
| Data scaling software | Aimless (0.7.4) |
| Phasing software | PHASER |
| Refinement software | BUSTER (2.10.3) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 33.720 | 33.720 | 1.630 |
| High resolution limit [Å] | 1.600 | 8.620 | 1.600 |
| Rmerge | 0.099 | 0.037 | 1.396 |
| Rmeas | 0.102 | 0.038 | 1.483 |
| Rpim | 0.025 | 0.008 | 0.496 |
| Total number of observations | 435154 | 4525 | 13290 |
| Number of reflections | 30154 | 249 | 1500 |
| <I/σ(I)> | 16.5 | 53.9 | 1.6 |
| Completeness [%] | 99.9 | 98.8 | 99.5 |
| Redundancy | 14.4 | 18.2 | 8.9 |
| CC(1/2) | 0.998 | 0.999 | 0.409 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 7 | 291 | 2 microliter of the BCL6-BTB/WVIP complex at 4 mg/mL plus 1 microliter of a crystallisation solution consisting of 1 M K2HPO4, 0.7 M NaH2PO4, 75 mM sodium acetate buffer pH 4.5 and 2 % DMSO, against 350 microliter of crystallisation solution. |






