7OK3
Crystal Structure of KRasG13C in Complex with Nucleotide-based Covalent Inhibitor edaGDP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.915 |
Spacegroup name | P 63 |
Unit cell lengths | 73.400, 73.400, 54.200 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 41.240 - 1.600 |
R-factor | 0.1601 |
Rwork | 0.158 |
R-free | 0.20010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4obe |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.243 | 1.700 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.098 | 0.966 |
Rmeas | 0.103 | 1.016 |
Number of reflections | 22009 | 3625 |
<I/σ(I)> | 12.71 | |
Completeness [%] | 100.0 | 100 |
Redundancy | 10.1 | |
CC(1/2) | 0.990 | 0.801 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M (NH4)F, 20 % PEG3350, 67 mg/mL KRasG13C-edaGDP, 0.1 uL reservoir + 0.1 uL protein solution |