7OBU
Crystal structure of holo-F210W mutant of Hydroxy ketone aldolase (SwHKA) from Sphingomonas wittichii RW1, with the active site in the resting and the active state
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9763 |
Spacegroup name | H 3 |
Unit cell lengths | 71.094, 71.094, 222.394 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.550 - 1.200 |
R-factor | 0.1305 |
Rwork | 0.129 |
R-free | 0.15710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6r62 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.110 |
Data reduction software | XDS |
Data scaling software | BIOMOL |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 59.340 | 59.340 | 1.220 |
High resolution limit [Å] | 1.200 | 6.570 | 1.200 |
Rmerge | 0.151 | 0.082 | 1.903 |
Rmeas | 0.160 | 0.087 | 2.026 |
Rpim | 0.052 | 0.027 | 0.678 |
Number of reflections | 131067 | 796 | 6497 |
<I/σ(I)> | 9.3 | ||
Completeness [%] | 99.9 | 99.7 | 100 |
Redundancy | 9.3 | 10.2 | 8.6 |
CC(1/2) | 0.998 | 0.996 | 0.542 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 277.15 | HEPES, Sodium Citrate |