7NN0
Crystal structure of the SARS-CoV-2 helicase in complex with AMP-PNP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-22 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9126 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 324.886, 59.500, 132.379 |
Unit cell angles | 90.00, 93.89, 90.00 |
Refinement procedure
Resolution | 81.030 - 3.040 |
R-factor | 0.2458 |
Rwork | 0.244 |
R-free | 0.28380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6zsl |
RMSD bond length | 0.004 |
RMSD bond angle | 0.850 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 81.030 | 3.090 |
High resolution limit [Å] | 3.040 | 3.040 |
Rmerge | 0.258 | 1.390 |
Number of reflections | 48372 | 2343 |
<I/σ(I)> | 6.1 | 1.2 |
Completeness [%] | 97.7 | |
Redundancy | 3.4 | |
CC(1/2) | 0.978 | 0.359 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20 % Ethylene Glycol, 10 % PEG 8K, 0.05 M MES pH 6.5, 0.05 M Imidazole pH 6.5, 10% v/v Alcohols mix |