Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7N8K

LINE-1 endonuclease domain complex with Mg

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]180
Detector technologyIMAGE PLATE
Collection date2019-07-18
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths42.857, 126.776, 44.854
Unit cell angles90.00, 98.94, 90.00
Refinement procedure
Resolution33.300 - 2.010
R-factor0.1949
Rwork0.192
R-free0.23610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vyb
RMSD bond length0.008
RMSD bond angle1.099
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwarePHENIX
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.040
High resolution limit [Å]2.0102.010
Rmerge0.0890.750
Rmeas0.104
Rpim0.055
Number of reflections309801505
<I/σ(I)>16.31.54
Completeness [%]98.293.7
Redundancy3.53
CC(1/2)0.9980.627
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION62980.1M LiSO4; 26% PEG 2000 MME

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon