7MO0
Crystal Structure of Nucleoporin NUP50 Ran-Binding Domain in Complex with Ran-GPPNHP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97942 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 66.590, 73.170, 152.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.730 - 2.450 |
R-factor | 0.2134 |
Rwork | 0.212 |
R-free | 0.23870 |
Structure solution method | SAD |
Data reduction software | XDS |
Data scaling software | xia2 |
Phasing software | AutoSol |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.730 | 29.730 | 2.540 |
High resolution limit [Å] | 2.450 | 5.270 | 2.450 |
Rmeas | 0.125 | 0.058 | 2.693 |
Rpim | 0.034 | 0.016 | 0.733 |
Total number of observations | 37155 | 36629 | |
Number of reflections | 52982 | 3022 | 2762 |
<I/σ(I)> | 15.3 | 40.6 | 1.1 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 13.1 | 12.3 | 13.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 294 | 25% w/v PEG3350, 0.2 M ammonium sulfate, 0.1 M HEPES |