7MES
Structure of ALDH4A1 complexed with trans-4-Hydroxy-D-proline
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-15 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 84.744, 94.105, 131.636 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 76.550 - 1.370 |
R-factor | 0.1612 |
Rwork | 0.161 |
R-free | 0.17170 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3v9j |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 131.640 | 1.390 |
High resolution limit [Å] | 1.370 | 1.370 |
Rmerge | 0.048 | 0.614 |
Rmeas | 0.051 | 0.656 |
Rpim | 0.017 | 0.226 |
Total number of observations | 1874978 | 71818 |
Number of reflections | 221058 | 9660 |
<I/σ(I)> | 23.7 | 2.8 |
Completeness [%] | 99.4 | 88.6 |
Redundancy | 8.5 | 7.4 |
CC(1/2) | 1.000 | 0.870 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M Bis Tris pH 6-7, 15-25% PEG 3350, and 0.2 M Li2SO4 |