7LW6
The crystal structure of the 2009/H1N1/California PA endonuclease I38T mutant in complex with Raltegravir
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-04-09 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 89.515, 89.515, 133.802 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.350 - 2.380 |
R-factor | 0.2188 |
Rwork | 0.216 |
R-free | 0.26460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vpt |
RMSD bond length | 0.012 |
RMSD bond angle | 0.873 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | PHENIX (1.19.1_4122) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 74.400 | 2.470 |
High resolution limit [Å] | 2.380 | 2.380 |
Rmerge | 0.051 | 0.961 |
Rmeas | 0.057 | 1.147 |
Rpim | 0.024 | 0.455 |
Number of reflections | 11154 | 1144 |
<I/σ(I)> | 15.1 | 1.9 |
Completeness [%] | 99.3 | 98.8 |
Redundancy | 5.7 | 6.1 |
CC(1/2) | 0.999 | 0.786 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1 M HEPES PH 7.8, 1 M AMMONIUM SULFATE, 10 MM MNCL2, 10 MM MGCL2, 0.5% PVP K15 |