7L72
Crystal structure of the second bromodomain (BD2) of human BRD3 bound to Ro3280
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2019-01-13 |
| Detector | RIGAKU SATURN 944+ |
| Wavelength(s) | 1.5417 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 55.580, 63.270, 40.040 |
| Unit cell angles | 90.00, 109.99, 90.00 |
Refinement procedure
| Resolution | 37.630 - 1.500 |
| R-factor | 0.1533 |
| Rwork | 0.152 |
| R-free | 0.18170 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3s92 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.19_4085) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 37.630 | 37.630 | 1.540 |
| High resolution limit [Å] | 1.500 | 6.710 | 1.500 |
| Rmerge | 0.060 | 0.061 | 0.042 |
| Rmeas | 0.073 | 0.073 | 0.059 |
| Number of reflections | 19458 | 243 | 1269 |
| <I/σ(I)> | 12.83 | 18.26 | 8.26 |
| Completeness [%] | 93.0 | 96 | 82.2 |
| Redundancy | 2.057 | 3.329 | 1.27 |
| CC(1/2) | 0.992 | 0.989 | 0.992 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.2 M L-Proline, 0.1 M HEPES pH 7.5, 10 % w/v Polyethylene glycol 3,350 |






