7L07
Last common ancestor of HMPPK and PLK/HMPPK vitamin kinases
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | LNLS BEAMLINE W01B-MX2 |
| Synchrotron site | LNLS |
| Beamline | W01B-MX2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-06-12 |
| Detector | DECTRIS PILATUS 2M |
| Wavelength(s) | 1.45854 |
| Spacegroup name | P 65 2 2 |
| Unit cell lengths | 65.644, 65.644, 243.726 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 46.580 - 2.000 |
| R-factor | 0.2079 |
| Rwork | 0.207 |
| R-free | 0.21520 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4c5k |
| RMSD bond length | 0.007 |
| RMSD bond angle | 1.017 |
| Data reduction software | XDS (1.0) |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.580 | 2.072 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.145 | 1.070 |
| Rmeas | 0.152 | |
| Rpim | 0.046 | 0.352 |
| Number of reflections | 22065 | 2142 |
| <I/σ(I)> | 13.52 | 2.06 |
| Completeness [%] | 99.9 | 99.86 |
| Redundancy | 10.9 | 10 |
| CC(1/2) | 0.998 | 0.793 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293 | Protein: 20 mM tris 7.8, 10 mM MgCl, 10 mM ADP, 1 mM AlCl3 and 30 mM NaF. Crystalization condition: 0.2 M Magnesium chloride hexahydrate, 0.1 M Tris pH 7.0 and 10% w/v PEG 8000 |






