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7KLY

Dihydrodipicolinate synthase (DHDPS) from C.jejuni, H59N mutant with pyruvate bound in the active site and L-lysine bound at the allosteric site

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-09
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9795
Spacegroup nameC 2 2 21
Unit cell lengths85.520, 231.490, 201.250
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.142 - 1.670
R-factor0.164
Rwork0.163
R-free0.19160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ly8
RMSD bond length0.012
RMSD bond angle1.224
Data reduction softwareHKL-3000
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX (dev_2398)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.1421.730
High resolution limit [Å]1.6701.670
Rmerge0.708
Number of reflections22968722741
<I/σ(I)>15.16
Completeness [%]99.999.96
Redundancy15
CC(1/2)0.990
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH7.4288.150.5 M Magnesium acetate, 8 % PEG 8000, 0.1 M Sodium acetate (pH 7.4), 60 mM L-Lysine

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PDB entries from 2024-05-15

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