7KLC
Crystal structure of M4H2K1 Fab bound to HIV-1 BG505 gp120 core and to 17b Fab
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-11-26 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.033 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 204.060, 60.633, 166.762 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.040 - 4.300 |
R-factor | 0.3034 |
Rwork | 0.302 |
R-free | 0.33440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDB entries 6ONF & 1GC1 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.835 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.16_3549) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 4.370 |
High resolution limit [Å] | 4.300 | 4.300 |
Number of reflections | 12843 | 280 |
<I/σ(I)> | 13 | |
Completeness [%] | 86.8 | |
Redundancy | 8.5 | |
CC(1/2) | 0.860 | 0.390 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1M Tris, pH 7, 1.825 M ammonium sulfate, 0.29 M lithium sulfate, 15% ethylene glycol |