7K6R
Crystal structure of the bromodomain (BD) of human Bromodomain and PHD finger-containing Transcription Factor (BPTF) bound to GSK4027
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-07-13 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 |
Unit cell lengths | 27.060, 35.520, 41.150 |
Unit cell angles | 114.12, 95.93, 91.06 |
Refinement procedure
Resolution | 37.280 - 1.600 |
R-factor | 0.1636 |
Rwork | 0.161 |
R-free | 0.19720 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3uv2 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.280 | 37.280 | 1.640 |
High resolution limit [Å] | 1.600 | 7.160 | 1.600 |
Rmerge | 0.035 | 0.021 | 0.218 |
Rmeas | 0.050 | 0.030 | 0.308 |
Total number of observations | 31539 | ||
Number of reflections | 17236 | 187 | 1262 |
<I/σ(I)> | 12.84 | 30.97 | 3.37 |
Completeness [%] | 93.8 | 92.1 | 93.5 |
Redundancy | 1.83 | 1.898 | 1.898 |
CC(1/2) | 0.998 | 0.998 | 0.866 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.2 M Lithium sulfate monohydrate, 0.1M BIS-TRIS, 25 percent Polyethylene glycol 3,350 |