7JMK
GTP-specific succinyl-CoA synthetase complexed with Mg-GDP in space group P32
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-01 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 32 |
Unit cell lengths | 99.762, 99.762, 134.206 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 53.000 - 2.500 |
R-factor | 0.2415 |
Rwork | 0.240 |
R-free | 0.26940 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fp4 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (dev_3885) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.650 | 2.540 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.088 | 0.528 |
Rpim | 0.045 | 0.259 |
Number of reflections | 51719 | 2593 |
<I/σ(I)> | 8.7 | 0.4 |
Completeness [%] | 100.0 | |
Redundancy | 4.8 | |
CC(1/2) | 0.997 | 0.840 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 294 | 1.0 M sodium citrate, Tris-HCl pH 7.4 |