7JKZ
Bromodomain-containing protein 4 (BRD4) bromodomain 2 (BD2) complexed with YF3-126
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.12713 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 63.010, 63.010, 102.722 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 54.570 - 2.490 |
R-factor | 0.1816 |
Rwork | 0.180 |
R-free | 0.21210 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ouo |
RMSD bond length | 0.012 |
RMSD bond angle | 1.683 |
Data reduction software | MOSFLM |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.570 | 2.590 |
High resolution limit [Å] | 2.490 | 2.490 |
Rmerge | 0.079 | 0.442 |
Rmeas | 0.084 | 0.466 |
Rpim | 0.028 | 0.147 |
Number of reflections | 8677 | 958 |
<I/σ(I)> | 16.3 | 4.9 |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 9.1 | 9.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | 0.2 M (NH4)2SO4, 0.1M Na cacodylate pH 6.5, 30% PEG 8000 |