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7FSB

Structure of liver pyruvate kinase in complex with allosteric modulator 41

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2021-03-11
DetectorDECTRIS EIGER2 X 16M
Wavelength(s)0.9795
Spacegroup nameC 1 2 1
Unit cell lengths208.049, 113.231, 188.473
Unit cell angles90.00, 91.84, 90.00
Refinement procedure
Resolution188.380 - 2.495
R-factor0.2679
Rwork0.267
R-free0.29180
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle0.920
Data reduction softwareXDS
Data scaling softwareSTARANISO
Phasing softwarePHASER
Refinement softwareBUSTER (2.10.4 (16-JUL-2021))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]103.971103.9712.724
High resolution limit [Å]2.4957.6542.495
Rmerge0.0860.0341.183
Rpim0.0350.0140.484
Total number of observations759423
Number of reflections10840854195421
<I/σ(I)>9.726.41.5
Completeness [%]94.3
Redundancy776.9
CC(1/2)0.9990.9990.744
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5291100 mM HEPES/MOPS, 10% PEG8000, 20% ethylene glycol, 10 mM phenylalanine, 20 mM sodium oxalate

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