7F49
von Willebrand factor (VWF) A1 domain with BT-100 aptamer RNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-29 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97894 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 64.980, 122.404, 42.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.550 - 2.090 |
R-factor | 0.209 |
Rwork | 0.207 |
R-free | 0.23880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1sq0 |
RMSD bond length | 0.004 |
RMSD bond angle | 1.945 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.2) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.590 | 2.200 |
High resolution limit [Å] | 2.090 | 2.090 |
Rmerge | 0.047 | 0.391 |
Rmeas | 0.052 | 0.452 |
Rpim | 0.021 | 0.219 |
Number of reflections | 19318 | 2840 |
<I/σ(I)> | 21.3 | |
Completeness [%] | 92.5 | 95.8 |
Redundancy | 6 | 3.9 |
CC(1/2) | 0.999 | 0.884 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.1M Sodium Acetate pH 4.6, 18% w/v PEG 4000 |