Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7EO8

Crystal structure of SARS coronavirus main protease in complex with an inhibitor Shikonin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U1
Synchrotron siteSSRF
BeamlineBL17U1
Temperature [K]100
Detector technologyCCD
Collection date2020-11-16
DetectorADSC QUANTUM 315r
Wavelength(s)0.97915
Spacegroup nameP 1
Unit cell lengths55.336, 60.620, 68.295
Unit cell angles90.94, 102.70, 108.62
Refinement procedure
Resolution27.327 - 2.281
R-factor0.229401915012
Rwork0.227
R-free0.27198
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7dqz
RMSD bond length0.007
RMSD bond angle0.958
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.12_2829)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.0302.400
High resolution limit [Å]2.2802.280
Rmerge0.0460.412
Number of reflections353485295
<I/σ(I)>14.4
Completeness [%]95.0
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2930.1M Hepes pH7.5, 10% PEG8000, 8% Ethylene glycol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon