7DZD
Crystal structure of uPA in complex with cleaved camostat
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | BRUKER AXS MICROSTAR |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-11-15 |
Detector | Bruker PHOTON II |
Wavelength(s) | 1.54 |
Spacegroup name | H 3 |
Unit cell lengths | 120.317, 120.317, 42.451 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 17.870 - 2.000 |
R-factor | 0.194 |
Rwork | 0.192 |
R-free | 0.23100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nwn |
RMSD bond length | 0.006 |
RMSD bond angle | 1.442 |
Data reduction software | APEX |
Data scaling software | APEX |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 60.160 | 2.030 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.021 | 0.064 |
Number of reflections | 15407 | 1520 |
<I/σ(I)> | 17.61 | |
Completeness [%] | 96.5 | |
Redundancy | 1.51 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 2.0M ammonium sulfate, 50mM sodium citrate pH 4.6, 5% PEG 400 |