Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

7DVD

The crystal structure of p53 DNA binding domain and PUMA complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPAL/PLS BEAMLINE 7A (6B, 6C1)
Synchrotron sitePAL/PLS
Beamline7A (6B, 6C1)
Temperature [K]100
Detector technologyCCD
Collection date2019-07-26
DetectorADSC QUANTUM 270
Wavelength(s)0.979
Spacegroup nameP 1
Unit cell lengths68.612, 73.411, 84.408
Unit cell angles89.94, 89.82, 90.00
Refinement procedure
Resolution26.280 - 2.590
R-factor0.2726
Rwork0.270
R-free0.31770
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2wxr
RMSD bond length0.009
RMSD bond angle1.143
Data reduction softwareHKL-2000
Data scaling softwareCoot
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.635
High resolution limit [Å]2.5902.590
Rmerge0.323
Number of reflections622032327
<I/σ(I)>13.506
Completeness [%]99.1
Redundancy3.7
CC(1/2)0.915
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7293.150.1 M Tris (pH 7.0) 20% (w/w) PEG-200 MME

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon