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7DL9

Crystal structure of nucleoside transporter NupG

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL18U1
Synchrotron siteSSRF
BeamlineBL18U1
Temperature [K]100
Detector technologyPIXEL
Collection date2019-11-20
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.9791
Spacegroup nameP 1
Unit cell lengths42.874, 68.715, 79.027
Unit cell angles81.11, 74.27, 84.02
Refinement procedure
Resolution25.566 - 3.000
R-factor0.2534
Rwork0.250
R-free0.27980
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)predicted model by the robetta website
Data reduction softwareXDS
Data scaling softwareAimless (0.7.3)
Phasing softwarePHASER
Refinement softwarePHENIX (1.14_3260)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]29.54029.5403.180
High resolution limit [Å]3.0009.0003.000
Rmerge0.1530.0580.452
Total number of observations5990920779914
Number of reflections169316172727
<I/σ(I)>6.814.12.8
Completeness [%]98.895.798.5
Redundancy3.53.43.6
CC(1/2)0.9860.9950.892
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIPIDIC CUBIC PHASE2930.1 M Citrate sodium (pH=5), 0.1 M NaCl 0.1 M MgCl2 , 30% PEG 600

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