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7C53

Crystal Structure of SARS-CoV-2 HR1 motif in complex with pan-CoVs inhibitor EK1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2020-05-15
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameC 2 2 21
Unit cell lengths133.815, 138.141, 71.461
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.057 - 2.278
R-factor0.1974
Rwork0.195
R-free0.24180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5zvm
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.0572.420
High resolution limit [Å]2.2782.280
Number of reflections306919427
<I/σ(I)>17.12
Completeness [%]99.7
Redundancy13.8
CC(1/2)0.9990.502
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP28930% MPD, 0.1 M Na Acetate pH 5.0, 0.02 M Calcium Chloride

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PDB entries from 2024-05-15

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