7C53
Crystal Structure of SARS-CoV-2 HR1 motif in complex with pan-CoVs inhibitor EK1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2020-05-15 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 133.815, 138.141, 71.461 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.057 - 2.278 |
R-factor | 0.1974 |
Rwork | 0.195 |
R-free | 0.24180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5zvm |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.057 | 2.420 |
High resolution limit [Å] | 2.278 | 2.280 |
Number of reflections | 30691 | 9427 |
<I/σ(I)> | 17.12 | |
Completeness [%] | 99.7 | |
Redundancy | 13.8 | |
CC(1/2) | 0.999 | 0.502 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 30% MPD, 0.1 M Na Acetate pH 5.0, 0.02 M Calcium Chloride |