7BRU
Crystal structure of human RTN3 LIR fused to human GABARAP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL32XU |
Synchrotron site | SPring-8 |
Beamline | BL32XU |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2019-10-09 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.0 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 137.418, 137.418, 67.444 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.131 - 2.149 |
R-factor | 0.2074 |
Rwork | 0.206 |
R-free | 0.22990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gnu |
RMSD bond length | 0.008 |
RMSD bond angle | 0.866 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.131 | 2.226 |
High resolution limit [Å] | 2.149 | 2.149 |
Rmerge | 0.072 | 0.838 |
Rmeas | 0.075 | 0.871 |
Rpim | 0.021 | 0.236 |
Number of reflections | 35698 | 3473 |
<I/σ(I)> | 20.14 | 2.43 |
Completeness [%] | 99.9 | 99.28 |
Redundancy | 13.2 | 13.4 |
CC(1/2) | 0.999 | 0.935 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.8 M potassium phosphate monobasic, 0.8 M sodium phosphate monobasic, 0.1 M HEPES pH 7.5 |