7AD0
X-ray structure of Mdm2 with modified p53 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.811, 76.082, 197.299 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.320 - 2.070 |
R-factor | 0.1895 |
Rwork | 0.187 |
R-free | 0.23850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tj2 |
RMSD bond length | 0.015 |
RMSD bond angle | 1.799 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.330 | 2.144 |
High resolution limit [Å] | 2.070 | 2.070 |
Rmeas | 0.115 | 1.318 |
Number of reflections | 43882 | 4309 |
<I/σ(I)> | 16.98 | |
Completeness [%] | 99.5 | |
Redundancy | 13.12 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277 | 0.1 M Bis-Tris pH 5.5 with 0.2 M NaCl and 25% PEG 3350 |