7AB8
Crystal structure of a GDNF-GFRalpha1 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-26 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 125.067, 55.544, 70.961 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.760 - 2.200 |
R-factor | 0.2006 |
Rwork | 0.199 |
R-free | 0.23020 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fub |
RMSD bond length | 0.006 |
RMSD bond angle | 0.747 |
Data reduction software | DIALS |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.780 | 2.279 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.056 | 0.371 |
Rmeas | 0.079 | 0.525 |
Rpim | 0.056 | 0.371 |
Number of reflections | 25823 | 1368 |
<I/σ(I)> | 12.3 | 3.15 |
Completeness [%] | 91.9 | 53.94 |
Redundancy | 2 | 2 |
CC(1/2) | 0.997 | 0.797 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 295 | Tris, PEG 20K, MeCN, NaCl |