6ZXI
Crystal Structure of the OXA-48 Carbapenem-Hydrolyzing Class D beta-Lactamase in Complex with the DBO inhibitor ANT3310
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-17 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97951 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 44.798, 105.106, 125.426 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 52.610 - 1.850 |
R-factor | 0.1742 |
Rwork | 0.172 |
R-free | 0.21750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3hbr |
RMSD bond length | 0.010 |
RMSD bond angle | 1.617 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 53.850 | 1.950 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.068 | 0.871 |
Number of reflections | 51511 | 7403 |
<I/σ(I)> | 14.8 | 2.2 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 7.5 | 7.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.1 M HEPES (pH 7,5), 12% PEG 4000, 3% 1-butanol |