6ZVQ
Complex between SMAD2 MH2 domain and peptide from Ski corepressor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-25 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9686 |
Spacegroup name | I 21 3 |
Unit cell lengths | 113.820, 113.820, 113.820 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 56.910 - 2.030 |
R-factor | 0.1665 |
Rwork | 0.164 |
R-free | 0.21010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1khx |
RMSD bond length | 0.007 |
RMSD bond angle | 0.918 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 56.910 | 2.104 |
High resolution limit [Å] | 2.030 | 2.031 |
Rmerge | 0.125 | 1.469 |
Rmeas | 0.132 | 1.547 |
Rpim | 0.042 | 0.485 |
Number of reflections | 15983 | 1565 |
<I/σ(I)> | 12.24 | 1.89 |
Completeness [%] | 100.0 | 100 |
Redundancy | 10 | 10.1 |
CC(1/2) | 0.998 | 0.635 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 293 | 1.5M Ammonium Sulphate, 0.15M Sodium Potassium Tartrate, 0.08M Tri-Sodium Citrate pH 5.6, 25% v/v Glycerol |