6ZS7
Crystal structure of delta466-491 cystathionine beta-synthase from Toxoplasma gondii with L-cysteine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9796 |
Spacegroup name | P 31 |
Unit cell lengths | 82.302, 82.302, 415.980 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 67.430 - 3.500 |
R-factor | 0.2718 |
Rwork | 0.271 |
R-free | 0.28140 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1jbq |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX (1.18) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 138.660 | 138.660 | 3.369 |
High resolution limit [Å] | 3.178 | 8.982 | 3.178 |
Rmerge | 0.367 | 0.061 | 2.127 |
Rmeas | 0.389 | 0.064 | 2.232 |
Rpim | 0.125 | 0.020 | 0.675 |
Total number of observations | 472238 | 22562 | 25453 |
Number of reflections | 46649 | 2332 | 2331 |
<I/σ(I)> | 10.4 | 27.8 | 1.4 |
Completeness [%] | 91.0 | 99.8 | 34.7 |
Redundancy | 10.1 | 9.7 | 10.9 |
CC(1/2) | 0.977 | 0.996 | 0.411 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.1 | 291 | 9% PEG 3350, 0.1M MES pH 6.1 |