6ZNW
Methanosaeta concilii ATP citrate lyase (D541A mutant) in complex with (3S)-citryl-CoA.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.976245 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 73.531, 154.373, 276.054 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 79.040 - 2.121 |
R-factor | 0.1866 |
Rwork | 0.186 |
R-free | 0.20340 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6hxi |
RMSD bond length | 0.008 |
RMSD bond angle | 0.930 |
Data reduction software | XDS (20200131) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 139.000 | 2.250 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmeas | 0.011 | 2.596 |
Number of reflections | 88579 | 13824 |
<I/σ(I)> | 18.58 | 0.92 |
Completeness [%] | 99.2 | 96.5 |
Redundancy | 13.6 | 11.4 |
CC(1/2) | 0.999 | 0.511 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.02 M xylitol 0.02 M myo-inositol 0.02 M D-(-)-fructose 0.02 M L-rhamnose monohydrate 0.02 M D-sorbitol 0.1 M BES/Triethanolamine pH 7.5 12.5 % PEG4000 20 % 1,2,6-hexanetriol |