6ZFE
Crystal structure of murine S100A9 mutant C80A bound to calcium and zinc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06DA |
Synchrotron site | SLS |
Beamline | X06DA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-08 |
Detector | DECTRIS PILATUS 2M-F |
Wavelength(s) | 1.2809 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 73.610, 38.800, 53.170 |
Unit cell angles | 90.00, 124.75, 90.00 |
Refinement procedure
Resolution | 43.688 - 2.350 |
R-factor | 0.2718 |
Rwork | 0.268 |
R-free | 0.30540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6zdy |
RMSD bond length | 0.002 |
RMSD bond angle | 0.461 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.688 | 43.688 | 2.440 |
High resolution limit [Å] | 2.350 | 20.000 | 2.350 |
Rmerge | 0.121 | 0.041 | 0.775 |
Rmeas | 0.132 | 0.046 | 0.843 |
Total number of observations | 34129 | ||
Number of reflections | 5224 | 11 | 550 |
<I/σ(I)> | 8.73 | 20.51 | 2.33 |
Completeness [%] | 98.5 | 91.7 | 98.6 |
Redundancy | 6.533 | 4.182 | 6.496 |
CC(1/2) | 0.997 | 1.000 | 0.901 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 0.1M Ammonium sulfate, 2 mM spermine tetraHCl, 50 mM Bis-Tris, 40% MPD |