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6Z6Q

Aspartyl/Asparaginyl beta-hydroxylase (AspH) oxygenase and TPR domains in complex with manganese, 3-ethyl-2-oxoglutarate, and factor X substrate peptide fragment(39mer-4Ser)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2020-05-14
DetectorDECTRIS EIGER2 XE 16M
Wavelength(s)0.97628
Spacegroup nameP 21 21 21
Unit cell lengths49.620, 91.371, 122.701
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.000 - 1.810
R-factor0.2085
Rwork0.208
R-free0.23210
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jtc
RMSD bond length0.011
RMSD bond angle0.997
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.0001.840
High resolution limit [Å]1.8101.810
Rmerge0.1805.809
Number of reflections517802579
<I/σ(I)>6.80.1
Completeness [%]100.0100
Redundancy1312.1
CC(1/2)0.9940.296
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7277100 mM HEPES sodium, 200 mM ammonium chloride, 20% w/v PEG 6000, 1 mM manganese chloride, 2 mM 3-ethyl-2-oxoglutarate, 18 mg/ml protein

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