6Z32
Human cation-independent mannose 6-phosphate/IGF2 receptor domains 7-11
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2013-03-07 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 1.05811 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 139.204, 139.204, 234.682 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 89.720 - 3.470 |
Rwork | 0.261 |
R-free | 0.30000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Homology models of D7 8 9 10 Crystal structure of D11 (1GP0) |
RMSD bond length | 0.007 |
RMSD bond angle | 1.564 |
Data reduction software | xia2 (0.5.902) |
Data scaling software | DIALS (1.14) |
Phasing software | PHASER (2.8.3) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 89.720 | 3.590 |
High resolution limit [Å] | 3.470 | 3.470 |
Number of reflections | 30224 | 2944 |
<I/σ(I)> | 6.03 | 0.84 |
Completeness [%] | 98.5 | 98.43 |
Redundancy | 14.5 | 14.9 |
CC(1/2) | 0.997 | 0.127 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 0.1 M MES pH 6.5, 1.6 M MgSO4, 10 mM mannose 6-phosphate |