6YVQ
Crystal structure of SAICAR Synthetase (PurC) from Mycobacterium abscessus in apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I02 |
Synchrotron site | Diamond |
Beamline | I02 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-07 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.078, 64.287, 48.020 |
Unit cell angles | 90.00, 110.55, 90.00 |
Refinement procedure
Resolution | 45.018 - 1.480 |
R-factor | 0.1637 |
Rwork | 0.162 |
R-free | 0.19680 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3r9r |
RMSD bond length | 0.006 |
RMSD bond angle | 1.045 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.1) |
Phasing software | PHASER (2.5.6) |
Refinement software | PHENIX (1.9-1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.020 | 45.020 | 1.580 |
High resolution limit [Å] | 1.480 | 4.180 | 1.480 |
Rmerge | 0.074 | 0.058 | 0.277 |
Rmeas | 0.085 | 0.066 | 0.340 |
Rpim | 0.040 | 0.032 | 0.191 |
Number of reflections | 41027 | 2075 | 4713 |
<I/σ(I)> | 10.8 | ||
Completeness [%] | 89.7 | 99.2 | 57.4 |
Redundancy | 4.1 | 4.3 | 2.9 |
CC(1/2) | 0.994 | 0.993 | 0.892 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.2 M LiSO4, 0.1 M Bis-Tris pH 5.5, 25 % PEG 3350 |