6YVJ
EED in complex with a triazolopyrimidine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.92819 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 87.020, 89.870, 99.140 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.940 - 1.840 |
R-factor | 0.182 |
Rwork | 0.182 |
R-free | 0.19900 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6sfb |
RMSD bond length | 0.010 |
RMSD bond angle | 1.000 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.31) |
Phasing software | AMoRE |
Refinement software | BUSTER |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.940 | 1.890 |
High resolution limit [Å] | 1.840 | 1.840 |
Rmerge | 0.098 | |
Rmeas | 0.106 | |
Rpim | 0.041 | 0.780 |
Total number of observations | 449506 | |
Number of reflections | 68048 | 4957 |
<I/σ(I)> | 14.3 | |
Completeness [%] | 99.9 | 99.7 |
Redundancy | 6.6 | 6.8 |
CC(1/2) | 0.999 | 0.586 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 20% PEG3350, 0.1M PCTP pH7.7, 130mM MgCl2 |