6YTU
Atomic-resolution structure of the coiled-coil dimerisation domain of human Arc
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9796 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 26.844, 42.556, 67.350 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 100.000 - 0.950 |
R-factor | 0.1042 |
Rwork | 0.103 |
R-free | 0.12410 |
Structure solution method | SAD |
RMSD bond length | 0.019 |
RMSD bond angle | 1.708 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXDE |
Refinement software | PHENIX (1.18) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 100.000 | 0.970 |
High resolution limit [Å] | 0.950 | 0.950 |
Rmeas | 0.085 | 1.455 |
Number of reflections | 44960 | 1366 |
<I/σ(I)> | 18.7 | 1 |
Completeness [%] | 90.7 | 38 |
Redundancy | 10.8 | 4.3 |
CC(1/2) | 0.907 | 0.384 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 281 | 45% MPD, 0.1 M Tris-HCl (pH 7.5) |