6YPN
Crystal Structure of CK2alpha with 2 molecules of ADP bound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-13 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9159 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.392, 45.225, 62.631 |
Unit cell angles | 90.00, 109.90, 90.00 |
Refinement procedure
Resolution | 53.970 - 1.580 |
R-factor | 0.2073 |
Rwork | 0.205 |
R-free | 0.24750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5cvh |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | BUSTER |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.970 | 53.970 | 1.660 |
High resolution limit [Å] | 1.580 | 4.990 | 1.580 |
Rmerge | 0.111 | 0.049 | 1.379 |
Rmeas | 0.120 | 0.053 | 1.572 |
Rpim | 0.045 | 0.019 | 0.731 |
Total number of observations | 10362 | 26550 | |
Number of reflections | 41463 | 1400 | 5962 |
<I/σ(I)> | 8.1 | 29.4 | 0.7 |
Completeness [%] | 99.4 | 99.8 | 98.6 |
Redundancy | 6.4 | 7.4 | 4.5 |
CC(1/2) | 0.998 | 0.999 | 0.418 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 298 | 20 %v/v PEGSM, 10 %v/v Glycerol, 0.2 M Na Form, 0.1 M Na-Phosphate |