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6YN1

Crystal structure of histone chaperone APLF acidic domain bound to the histone H2A-H2B-H3-H4 octamer

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X6A
Synchrotron siteNSLS
BeamlineX6A
Temperature [K]100
Detector technologyPIXEL
Collection date2020-03-16
DetectorDECTRIS PILATUS 2M-F
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths105.224, 189.686, 204.324
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.990 - 2.350
R-factor0.1796
Rwork0.177
R-free0.23250
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2hio
RMSD bond length0.009
RMSD bond angle0.954
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.330
High resolution limit [Å]2.2002.200
Rmerge0.1393.200
Rmeas0.1513.400
Rpim0.058
Number of reflections20679923719
<I/σ(I)>11.10.54
Completeness [%]99.8
Redundancy6.6
CC(1/2)0.9900.170
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2770.1 M sodium cacodylate pH6.5, 1.0 M tri-sodium citrate

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