6YN0
Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 1 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-14 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.978565 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 63.143, 283.021, 62.693 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.170 - 2.400 |
R-factor | 0.226 |
Rwork | 0.225 |
R-free | 0.25600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5hla |
RMSD bond length | 0.008 |
RMSD bond angle | 0.920 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | BUSTER |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.170 | 2.510 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.250 | |
Rmeas | 0.265 | 3.810 |
Number of reflections | 25830 | 6891 |
<I/σ(I)> | 8.1 | 1.5 |
Completeness [%] | 95.5 | 85.9 |
Redundancy | 8.5 | 7.2 |
CC(1/2) | 0.995 | 0.279 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293 | (NH4)2SO4 0.1M, sodium Formate 0.3M, Tris-Hcl 0,1M, low molecular weight poly-glutamic acids (PGA-LM) 3% w/v, PEG 550 MME 20% v/v |