6YL4
Soluble epoxide hydrolase in complex with 3-((R)-3-(1-hydroxyureido)but-1-yn-1-yl)-N-((S)-3-phenyl-3-(4-trifluoromethoxy)phenyl)propyl)benzamide
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ESRF BEAMLINE ID29 |
| Synchrotron site | ESRF |
| Beamline | ID29 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-09-16 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.072 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 79.934, 92.238, 106.646 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.119 - 2.001 |
| R-factor | 0.185 |
| Rwork | 0.184 |
| R-free | 0.20730 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.906 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.119 | 2.073 |
| High resolution limit [Å] | 2.001 | 2.001 |
| Number of reflections | 26716 | 2418 |
| <I/σ(I)> | 13.69 | 1.57 |
| Completeness [%] | 98.8 | 89.62 |
| Redundancy | 6.5 | |
| CC(1/2) | 0.999 | 0.721 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 277 | 1 uL protein solution (5-10 mg/mL, 50 mM NaCl, 50 mM sodium phosphate, 10% (v/v) glycerol (98%), 2 mM DTT at pH 7.4) was mixed at differnt ratios (2/1, 1/1, 1/2) with precipitant solution (23%-28% (w/v) polyethenglycol (PEG) 6000, 70 mM ammonium acetat, 200 mM magnesium acetat, 100 mM sodium cacodylate at pH 6.1-6.5) |






