6YK6
Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-Amino-2'-carboxyethyl)furo[3,4-d]pyrimidin-2,4-dione at resolution 1.47A
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-3 |
Synchrotron site | MAX II |
Beamline | I911-3 |
Temperature [K] | 105 |
Detector technology | CCD |
Collection date | 2013-09-10 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.00001 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 59.280, 95.071, 48.408 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.535 - 1.469 |
R-factor | 0.1524 |
Rwork | 0.151 |
R-free | 0.17150 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1syh |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.535 | 47.535 | 1.550 |
High resolution limit [Å] | 1.469 | 4.640 | 1.470 |
Rmerge | 0.021 | 0.375 | |
Rmeas | 0.047 | 0.024 | 0.422 |
Rpim | 0.021 | 0.011 | 0.190 |
Total number of observations | 236886 | 7755 | 31519 |
Number of reflections | 47393 | 1654 | 6735 |
<I/σ(I)> | 20.7 | 53.9 | 3.3 |
Completeness [%] | 99.8 | 99.3 | 98.7 |
Redundancy | 5 | 4.7 | 4.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 | 279 | 24.4% PEG4000, 0.15M lithium sulfate, 0.1M phosphate-citrate |