Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YK6

Structure of the AMPA receptor GluA2o ligand-binding domain (S1S2J) in complex with the compound (S)-1-(2'-Amino-2'-carboxyethyl)furo[3,4-d]pyrimidin-2,4-dione at resolution 1.47A

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX II BEAMLINE I911-3
Synchrotron siteMAX II
BeamlineI911-3
Temperature [K]105
Detector technologyCCD
Collection date2013-09-10
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)1.00001
Spacegroup nameP 21 21 2
Unit cell lengths59.280, 95.071, 48.408
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.535 - 1.469
R-factor0.1524
Rwork0.151
R-free0.17150
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1syh
Data reduction softwareXDS
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.53547.5351.550
High resolution limit [Å]1.4694.6401.470
Rmerge0.0210.375
Rmeas0.0470.0240.422
Rpim0.0210.0110.190
Total number of observations236886775531519
Number of reflections4739316546735
<I/σ(I)>20.753.93.3
Completeness [%]99.899.398.7
Redundancy54.74.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP4.527924.4% PEG4000, 0.15M lithium sulfate, 0.1M phosphate-citrate

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon