Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6YJ2

Structural and DNA binding studies of the transcriptional repressor Rv2506 (BkaR) from Mycobacterium tuberculosis supports a role in L-Leucine catabolism

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSOLEIL BEAMLINE PROXIMA 1
Synchrotron siteSOLEIL
BeamlinePROXIMA 1
Temperature [K]100
Detector technologyPIXEL
Collection date2014-12-07
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.97857
Spacegroup nameC 1 2 1
Unit cell lengths181.764, 52.874, 91.919
Unit cell angles90.00, 90.10, 90.00
Refinement procedure
Resolution46.000 - 2.000
R-factor0.1936
Rwork0.192
R-free0.22450
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4g12
RMSD bond length0.008
RMSD bond angle1.474
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0238)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.0002.050
High resolution limit [Å]2.0002.000
Rmerge0.0520.554
Rpim0.0340.351
Number of reflections592294355
<I/σ(I)>12.52.3
Completeness [%]99.799.8
Redundancy3.43.5
CC(1/2)0.9980.808
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72890.22 M ammonium citrate tribasic pH 7.0, 26.4 % (w/v) polyethylene glycol (PEG) 3350

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon