6YIZ
Crystal structure of PqsR (MvfR) ligand-binding domain in complex with triazolo-pyridine inverse agonist A
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PETRA III, DESY BEAMLINE P11 |
| Synchrotron site | PETRA III, DESY |
| Beamline | P11 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-10-28 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0332 |
| Spacegroup name | C 2 2 21 |
| Unit cell lengths | 109.810, 120.650, 113.190 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 60.320 - 2.163 |
| R-factor | 0.2058 |
| Rwork | 0.203 |
| R-free | 0.25970 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2q7v |
| RMSD bond length | 0.014 |
| RMSD bond angle | 1.593 |
| Data reduction software | XDS |
| Data scaling software | STARANISO |
| Phasing software | PHASER (2.8.3) |
| Refinement software | PHENIX (1.18rc4) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 93.600 | 2.453 |
| High resolution limit [Å] | 2.160 | 2.163 |
| Rmerge | 0.113 | |
| Rmeas | 0.118 | |
| Rpim | 0.032 | |
| Number of reflections | 20478 | 1023 |
| <I/σ(I)> | 15 | |
| Completeness [%] | 93.6 | 73.9 |
| Redundancy | 13 | 2.1 |
| CC(1/2) | 0.999 | 0.540 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 150 mM MgCl2 1.180 M LiCl 0.1 M MES pH 6.2 10 mg/ml PqsR + 1.5 mM triazolo-pyridine inverse agonist A + 0.4 mM Ponceau 4 R |






