6YGT
Crystal structure of variant T52P of the intracellular chorismate mutase from Mycobacterium tuberculosis
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE MASSIF-1 |
Synchrotron site | ESRF |
Beamline | MASSIF-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-10-22 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 0.967700 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 59.590, 59.590, 46.579 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.698 - 1.635 |
Rwork | 0.240 |
R-free | 0.26450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5mpv |
RMSD bond length | 0.011 |
RMSD bond angle | 1.711 |
Data reduction software | XDS (Mar 15, 2019 BUILT=20191211) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (Phaser-2.8.3 (svn 8432)) |
Refinement software | REFMAC (5.8.0258) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.698 | 1.716 |
High resolution limit [Å] | 1.635 | 1.635 |
Rmerge | 0.075 | |
Rmeas | 0.081 | |
Rpim | 0.029 | |
Number of reflections | 9569 | 478 |
<I/σ(I)> | 15.7 | |
Completeness [%] | 88.1 | 33.4 |
Redundancy | 8.7 | 9.8 |
CC(1/2) | 0.995 | 0.445 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293.15 | 0.2 M Sodium malonate, 0.1 M Bis Tris propane pH=8.5, 20% w/v PEG 3350 |