6YGG
NADase from Aspergillus fumigatus complexed with a substrate anologue
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-09-28 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.91589 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.050, 64.318, 161.007 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.660 - 1.850 |
R-factor | 0.1874 |
Rwork | 0.185 |
R-free | 0.22590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | D_1292105770 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.001 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.660 | 1.916 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.143 | 1.658 |
Number of reflections | 45536 | 4447 |
<I/σ(I)> | 9.33 | 0.95 |
Completeness [%] | 98.5 | |
Redundancy | 6.7 | |
CC(1/2) | 0.998 | 0.513 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M sodium acetate, 0.3 M CaCl2 and 20-25% (w/v) PEG 8000 |