6YGC
Crystal structure of the NatC complex bound to Arl3 peptide and CoA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-11 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9184 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.303, 139.724, 166.824 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.397 - 2.994 |
R-factor | 0.1986 |
Rwork | 0.196 |
R-free | 0.24830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6yga |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.397 | 46.397 | 3.170 |
High resolution limit [Å] | 2.990 | 8.830 | 2.990 |
Rmerge | 0.166 | 0.031 | 0.884 |
Rmeas | 0.191 | 0.037 | 1.013 |
Total number of observations | 94075 | ||
Number of reflections | 23309 | 987 | 3667 |
<I/σ(I)> | 8.42 | 33.21 | 1.6 |
Completeness [%] | 98.7 | 95.4 | 98.7 |
Redundancy | 4.036 | 3.616 | 4.145 |
CC(1/2) | 0.991 | 0.998 | 0.624 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 293 | 16% PEG 4000, 150 mM ammonium iodide and 100 mM sodium citrate, pH 6.2 |