6YG4
Crystal structure of MKK7 (MAP2K7) in complex with K00007
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-08-04 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.100, 72.630, 83.079 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.060 - 2.300 |
R-factor | 0.2129 |
Rwork | 0.211 |
R-free | 0.25490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2dyl |
RMSD bond length | 0.012 |
RMSD bond angle | 1.263 |
Data reduction software | iMOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0253) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 36.060 | 36.059 | 2.420 |
High resolution limit [Å] | 2.300 | 7.270 | 2.300 |
Rmerge | 0.066 | 0.045 | 0.745 |
Rmeas | 0.075 | 0.051 | 0.835 |
Rpim | 0.034 | 0.024 | 0.371 |
Number of reflections | 15049 | 529 | 2162 |
<I/σ(I)> | 11.2 | 10.3 | 1 |
Completeness [%] | 99.6 | 97.4 | 99.8 |
Redundancy | 4.6 | 4.1 | 4.7 |
CC(1/2) | 0.998 | 0.691 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.2 | 277.15 | 19% PEG3350, 0.1 M ammonium acetate, 0.1 M tris, pH 8.2 |