6Y6F
Crystal structure of STK17B (DRAK2) in complex with PKIS43
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-05-26 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.91840 |
Spacegroup name | P 41 2 2 |
Unit cell lengths | 83.650, 83.650, 114.720 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 83.650 - 1.980 |
R-factor | 0.184 |
Rwork | 0.182 |
R-free | 0.22310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3lm5 |
RMSD bond length | 0.016 |
RMSD bond angle | 1.667 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless (0.5.32) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 83.650 | 34.780 | 2.090 |
High resolution limit [Å] | 1.980 | 6.260 | 1.980 |
Rmerge | 0.174 | 0.058 | 0.877 |
Rmeas | 0.204 | 0.063 | 1.031 |
Rpim | 0.078 | 0.025 | 0.388 |
Number of reflections | 28957 | 1020 | 4174 |
<I/σ(I)> | 7.9 | 2 | |
Completeness [%] | 99.8 | 98.2 | 100 |
Redundancy | 6.5 | 6 | 6.7 |
CC(1/2) | 0.993 | 0.997 | 0.570 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 277.15 | 16% PEG 3350, 0.1M NaCl, 0.1M bis-tris 5.5 |